Web2 days ago · The five subfamilies of genes had similar cis-acting element types, but the number of copies of each cis-acting element differed. Among these cis-acting elements, ABA-responsive, MeJA-responsive, low-temperature-responsive, and light-responsive elements were the most common, suggesting that EfAP2/ERF genes might have … The genome of an organism contains anywhere from a few hundred to thousands of different genes, all encoding a singular product or more. For numerous reasons, including organizational maintenance, energy conservation, and generating phenotypic variance, it is important that genes are only expressed when they are needed. The most efficient way for an organism to regulate gen…

Rare Variants Residing in Novel Cis-Acting Element in Visual …

Cis-regulatory elements are often binding sites for one or more trans-acting factors. To summarize, cis-regulatory elements are present on the same molecule of DNA as the gene they regulate whereas trans-regulatory elements can regulate genes distant from the gene from which they were transcribed. See more Cis-regulatory elements (CREs) or Cis-regulatory modules (CRMs) are regions of non-coding DNA which regulate the transcription of neighboring genes. CREs are vital components of genetic regulatory networks, … See more Cis-regulatory modules can be characterized by the information processing that they encode and the organization of their … See more The function of a gene regulatory network depends on the architecture of the nodes, whose function is dependent on the multiple cis-regulatory modules. The layout of cis-regulatory modules can provide enough information to generate spatial and … See more Besides experimentally determining CRMs, there are various bioinformatics algorithms for predicting them. Most algorithms try to search for significant combinations of transcription factor binding sites (DNA binding sites) in promoter sequences … See more The genome of an organism contains anywhere from a few hundred to thousands of different genes, all encoding a singular product or more. For numerous reasons, including organizational maintenance, energy conservation, and generating See more CREs have an important evolutionary role. The coding regions of genes are often well conserved among organisms; yet different organisms display … See more Cis-regulatory modules can regulate their target genes over large distances. Several models have been proposed to describe the way that these modules may communicate with … See more WebWhen transcription factors bind to the promoter just upstream of the encoded gene, it is referred to as a cis-acting element, because it is on the same chromosome just next to … bricktown elks lodge

Genome Annotation Tools: Promoters-Cis Elements - Arabidopsis

WebFigure 1.34 A cis -acting site controls the adjacent DNA but does not influence the other allele. Figure 1.34 shows that a deficiency in the control site affects only the coding region to which it is connected; it does not … WebDatabase of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences. PlantProm DB Database with annotated, non-redundant collection … WebDatabase of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences. PlantProm DB Database with annotated, non-redundant collection of proximal promoter sequences for RNA polymerase II with experimentally determined transcription start sites (TSS) from various plant species. Place bricktown events mount union pa